Protein ZmNAC1 | |
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Information | |
TF Name: | ZmNAC1 |
Species: | Maize |
TF Family: | NAC |
Gene Name(Synonym): | NACTF1 |
Uniprot ID: | K7V0G1 |
Subgenome: | 2 |
ZmNAC1 is a protein in the NAC family.
Overview of domains present in v5 transcripts | |
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PF02365 | |
Zm00001eb359950_T002 | |
Zm00001eb359950_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d011555 | DAPseq | sequence | fimo | position | |
Zm00001d011555 | DAPseq | sequence | fimo | position | |
Zm00001d011555 | ChIPseq | sequence | fimo | position | |
Zm00001d011555 | PChIPseq | sequence | fimo | position |
MTWCNSFNDVRAVEDNLATAAAAKKQQLQASSHVNLIRTCPSCGHRAQYDEQVQQAAAIQDLPGLPAGVKFDPTDQELLE
HLEGKARPDTRKLHPLVDEFIPTIEGENGICYTHPERLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEEGGETRWH
KTGKTRPVFTGGKLSGYKKILVLYTNYGKQRKPEKTNWVMHQYHMGSDEEEKDGELVVSKVFYQTQPRQCGTVSSTARDA
VPLAASATTGHHHHDGGNGGDDENSMLMKEVGIVDFYSR
MTWCNSFNDVRAVEDNLATAAAAKKQQLQASSHVNLIRTCPSCGHRAQYDEQVQQAAAIQDLPGLPAGVKFDPTDQELLE
HLEGKARPDTRKLHPLVDEFIPTIEGENGICYTHPERLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEEGGETRWH
KTGKTRPVFTGGKLSGYKKILVLYTNYGKQRKPEKTNWVMHQYHMGSDEEEKDGELVVSKVFYQTQPRQCGTVSSTARDA
VPLAASATTGHHHHDGGNGGDDENSMLMKEVGIVDFYSR
MTWCNSFNDVRAVEDNLATAAAAKKQQLQASSHVNLIRTCPSCGHRAQYDEQVQQAAAIQDLPGLPAGVKFDPTDQELLE
HLEGKARPDTRKLHPLVDEFIPTIEGENGICYTHPERLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEEGGETRWH
KTGKTRPVFTGGKLSGYKKILVLYTNYGKQRKPEKTNWVMHQYHMGSDEEEKDGELVVSKVFYQTQPRQCGTVSSTARDA
VPLAASATTGHHHHDGGNGGDDENSMLMKEVGIVDFYSR
MTWCNSFNDVRAVEDNLATAAAAKKQQLQASSHVNLIRTCPSCGHRAQYDEQVQQAAAIQDLPGLPAGVKFDPTDQELLE
HLEGKARPDTRKLHPLVDEFIPTIEGENGICYTHPERLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEEGGETRWH
KTGKTRPVFTGGKLSGYKKILVLYTNYGKQRKPEKTNWVMHQYHMGSDEEEKDGELVVSKVFYQTQPRQCGTVSSTARDA
VPLAASATTGHHHHDGGNGGDDENSMLMKEVGIVDFYSR
MTWCNSFNDVRAVEDNLATAAAAKKQQLQASSHVNLIRTCPSCGHRAQYDEQVQQAAAIQDLPGLPAGVKFDPTDQELLE
HLEGKARPDTRKLHPLVDEFIPTIEGENGICYTHPERLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEEGGETRWH
KTGKTRPVFTGGKLSGYKKILVLYTNYGKQRKPEKTNWVMHQYHMGSDEEEKDGELVVSKVFYQTQPRQCGTVSSTARDA
VPLAASATTGHHHHDGGNGGDDENSMLMKEVGIVDFYSR
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF02365 |
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Hover here to show all domains |
TTATTTATTAGATGTTGAATATTGC...
TTATTTATTAGATGTTGAATATTGCCAGTACGGGCAGCGTGCTCGCAGCCAGCTCGTGGCGCATCTGGTAGGGGTACTAGTGGCGATCGATTTTCTTGGTCTGTTCTCCCAGCGAGAGACGGAAGGTAGCGCCGCGCACCAAGCGGCCGGTAGCTTTTAACAGGGACAAGCTTCCTCTCCCTGCCCTCTTTTCTCTCTCTTTGTTCTTGTCTCGGCCACTTTGTTCCCTCGCCCTCTTCTTTTGCGCGGCCTGTCATTCCCCTGGGGATCAGCCTTGGCGTTGCCTCATATGGGGGCGAGCTGAGGAGCAAAGCGGACAACAAGAGGCTTTCGATCGATCTCCCTCCCTATCTCTCTCTCTCTGCTATCCCTTCCCCTGCTTCCCTCCCCCCTAGCTTTTAGTAGAAAGAGGAGGGCCGGGACGTGGTGACAAGGCTAGGCTAGCTTGGGGCCGGCGGAGATCGATCGTCGTCGTCGACGGCCATGACATGGTGCAACAGCTTCAACGACGTGCGTGCCGTGGAGGACAACCTGGCCACCGCCGCCGCCGCCAAGAAACAGCAGCTGCAGGCCTCCTCCCACGTCAACCTCATCAGGACCTGCCCCTCCTGCGGACACCGCGCGCAGTATGACGAACAGGTGCAGCAGGCGGCGGCGATCCAGGACCTGCCGGGGCTGCCGGCGGGCGTGAAGTTCGATCCGACGGACCAGGAGCTGCTGGAGCACCTGGAGGGGAAGGCGAGGCCGGACACCCGCAAGCTGCACCCGCTCGTCGACGAGTTCATCCCCACCATCGAGGGCGAGAACGGCATCTGCTACACGCATCCGGAGAGACTTCCTGGTGTCGGCAAAGACGGACTGATCCGGCACTTCTTCCACCGCCCGTCCAAGGCTTACACGACGGGGACGAGGAAGCGGCGGAAGGTCCACACCGACGAGGAGGGAGGCGAGACGCGGTGGCACAAGACGGGCAAGACCCGGCCGGTGTTCACCGGCGGAAAACTCAGCGGCTACAAGAAGATTCTGGTACTCTACACTAACTACGGGAAGCAGCGGAAGCCGGAGAAGACAAACTGGGTGATGCATCAGTACCACATGGGGTCCGACGAGGAGGAGAAAGACGGCGAGCTCGTTGTCTCCAAGGTGTTCTACCAGACGCAGCCGAGGCAGTGCGGCACCGTTTCGTCGACAGCTAGGGACGCTGTCCCACTGGCTGCCAGCGCGACGACTGGTCACCACCACCATGACGGTGGCAATGGCGGCGACGACGAGAACAGCATGCTGATGAAGGAAGTAGGCATTGTAGATTTCTATAGCCGGG
MTWCNSFNDVRAVEDNLATAAAAKKQQLQASSHVNLIRTCPSCGHRAQYDEQVQQAAAIQDLPGLPAGVKFDPTDQELLE
HLEGKARPDTRKLHPLVDEFIPTIEGENGICYTHPERLPGQ
CTTTTGCGCGGCCTGTCATTCCCCT...
CTTTTGCGCGGCCTGTCATTCCCCTGGGGATCAGCCTTGGCGTTGCCTCATATGGGGGCGAGCTGAGGAGCAAAGCGGACAACAAGAGGCTTTCGATCGATCTCCCTCCCTATCTCTCTCTCTCTGCTATCCCTTCCCCTGCTTCCCTCCCCCCTAGCTTTTAGTAGAAAGAGGAGGGCCGGGACGTGGTGACAAGGCTAGGCTAGCTTGGGGCCGGCGGAGATCGATCGTCGTCGTCGACGGCCATGACATGGTGCAACAGCTTCAACGACGTGCGTGCCGTGGAGGACAACCTGGCCACCGCCGCCGCCGCCAAGAAACAGCAGCTGCAGGCCTCCTCCCACGTCAACCTCATCAGGACCTGCCCCTCCTGCGGACACCGCGCGCAGTATGACGAACAGGTGCAGCAGGCGGCGGCGATCCAGGACCTGCCGGGGCTGCCGGCGGGCGTGAAGTTCGATCCGACGGACCAGGAGCTGCTGGAGCACCTGGAGGGGAAGGCGAGGCCGGACACCCGCAAGCTGCACCCGCTCGTCGACGAGTTCATCCCCACCATCGAGGGCGAGAACGGCATCTGCTACACGCATCCGGAGAGACTTCCTGGTCAGTAGCTAGCCACGCCAACAAAGTTTTTTTTGAGTGCTGCTGAATTACATCATCTATCAAAAGGAAAAAAAAAAGAGAAAAGAATAGCTCC
MTWCNSFNDVRAVEDNLATAAAAKKQQLQASSHVNLIRTCPSCGHRAQYDEQVQQAAAIQDLPGLPAGVKFDPTDQELLE
HLEGKARPDTRKLHPLVDEFIPTIEGENGICYTHPERLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEEGGETRWH
KTGKTRPVFTGGKLSGYKKILVLYTNYGKQRKPEKTNWVMHQYHMGSDEEEKDGELVVSKVFYQTQPRQCGTVSSTARDA
VPLAASATTGHHHHDGGNGGDDENSMLMKEVGIVDFYSRGGGGGGGR
GGCCATGACATGGTGCAACAGCTTC...
GGCCATGACATGGTGCAACAGCTTCAACGACGTGCGTGCCGTGGAGGACAACCTGGCCACCGCCGCCGCCGCCAAGAAACAGCAGCTGCAGGCCTCCTCCCACGTCAACCTCATCAGGACCTGCCCCTCCTGCGGACACCGCGCGCAGTATGACGAACAGGTGCAGCAGGCGGCGGCGATCCAGGACCTGCCGGGGCTGCCGGCGGGCGTGAAGTTCGATCCGACGGACCAGGAGCTGCTGGAGCACCTGGAGGGGAAGGCGAGGCCGGACACCCGCAAGCTGCACCCGCTCGTCGACGAGTTCATCCCCACCATCGAGGGCGAGAACGGCATCTGCTACACGCATCCGGAGAGACTTCCTGGTGTCGGCAAAGACGGACTGATCCGGCACTTCTTCCACCGCCCGTCCAAGGCTTACACGACGGGGACGAGGAAGCGGCGGAAGGTCCACACCGACGAGGAGGGAGGCGAGACGCGGTGGCACAAGACGGGCAAGACCCGGCCGGTGTTCACCGGCGGAAAACTCAGCGGCTACAAGAAGATTCTGGTACTCTACACTAACTACGGGAAGCAGCGGAAGCCGGAGAAGACAAACTGGGTGATGCATCAGTACCACATGGGGTCCGACGAGGAGGAGAAAGACGGCGAGCTCGTTGTCTCCAAGGTGTTCTACCAGACGCAGCCGAGGCAGTGCGGCACCGTTTCGTCGACAGCTAGGGACGCTGTCCCACTGGCTGCCAGCGCGACGACTGGTCACCACCACCATGACGGTGGCAATGGCGGCGACGACGAGAACAGCATGCTGATGAAGGAAGTAGGCATTGTAGATTTCTATAGCCGGGGGGGGGGGGGGGGGGGGGGGCGCTAA
MTNSDRIVVHQVQQAAAIQDLPGLPAGVKFDPTDQELLEHLEGKARPDTRKLHPLVDEFIPTIEGENGICYTHPERLPGV
GKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEEGGETRWHKTGKTRPVFTGGKLSGYKKILVLYTNYGKQRKPEKTNWVMH
QYHMGSDEEEKDGELVVSKVFYQTQPRQCGTVSSTARDAVPLAASATTGHHHHDGGNGGDDENSMLMKEVGIVDFYSR
TTATTTATTAGATGTTGAATATTGC...
TTATTTATTAGATGTTGAATATTGCCAGTACGGGCAGCGTGCTCGCAGCCAGCTCGTGGCGCATCTGGTAGGGGTACTAGTGGCGATCGATTTTCTTGGTCTGTTCTCCCAGCGAGAGACGGAAGGTAGCGCCGCGCACCAAGCGGCCGGTAGCTTTTAACAGGGACAAGCTTCCTCTCCCTGCCCTCTTTTCTCTCTCTTTGTTCTTGTCTCGGCCACTTTGTTCCCTCGCCCTCTTCTTTTGCGCGGCCTGTCATTCCCCTGGGGATCAGCCTTGGCGTTGCCTCATATGGGGGCGAGCTGAGGAGCAAAGCGGACAACAAGAGGCTTTCGATCGATCTCCCTCCCTATCTCTCTCTCTCTGCTATCCCTTCCCCTGCTTCCCTCCCCCCTAGCTTTTAGTAGAAAGAGGAGGGCCGGGACGTGGTGACAAGGCTAGGCTAGCTTGGGGCCGGCGGAGATCGATCGTCGTCGTCGACGGCCATGACATGGTGCAACAGCTTCAACGACGTGCGTGCCGTGGAGGACAACCTGGCCACCGCCGCCGCCGCCAAGAAACAGCAGCTGCAGGCCTCCTCCCACGTCAACCTCATCAGGACCTGCCCCTCCTGCGGACACCGCGCGCAGTATGACGAACAGCGATCGGATCGTCGTCCATCAGGTGCAGCAGGCGGCGGCGATCCAGGACCTGCCGGGGCTGCCGGCGGGCGTGAAGTTCGATCCGACGGACCAGGAGCTGCTGGAGCACCTGGAGGGGAAGGCGAGGCCGGACACCCGCAAGCTGCACCCGCTCGTCGACGAGTTCATCCCCACCATCGAGGGCGAGAACGGCATCTGCTACACGCATCCGGAGAGACTTCCTGGTGTCGGCAAAGACGGACTGATCCGGCACTTCTTCCACCGCCCGTCCAAGGCTTACACGACGGGGACGAGGAAGCGGCGGAAGGTCCACACCGACGAGGAGGGAGGCGAGACGCGGTGGCACAAGACGGGCAAGACCCGGCCGGTGTTCACCGGCGGAAAACTCAGCGGCTACAAGAAGATTCTGGTACTCTACACTAACTACGGGAAGCAGCGGAAGCCGGAGAAGACAAACTGGGTGATGCATCAGTACCACATGGGGTCCGACGAGGAGGAGAAAGACGGCGAGCTCGTTGTCTCCAAGGTGTTCTACCAGACGCAGCCGAGGCAGTGCGGCACCGTTTCGTCGACAGCTAGGGACGCTGTCCCACTGGCTGCCAGCGCGACGACTGGTCACCACCACCATGACGGTGGCAATGGCGGCGACGACGAGAACAGCATGCTGATGAAGGAAGTAGGCATTGTAGATTTCTATAGCCGGG
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